Cluster: HRGMv2_3783_CGC20
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_3783
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3783_12 | HRGMv2_3783_12_34 | 32664 | 35072 | - | CBM67 | GH78 |
| CAZyme | HRGMv2_3783_12 | HRGMv2_3783_12_35 | 35312 | 38314 | + | GH148 |
| NULL(UNKNOWN) | HRGMv2_3783_12 | HRGMv2_3783_12_36 | 38329 | 39057 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3783_12 | HRGMv2_3783_12_37 | 39071 | 40216 | + | GH28 |
| pfam | HRGMv2_3783_12 | HRGMv2_3783_12_38 | 40299 | 40946 | - | SBP_bac_10 |
| NULL(UNKNOWN) | HRGMv2_3783_12 | HRGMv2_3783_12_39 | 40943 | 41035 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3783_12 | HRGMv2_3783_12_40 | 41032 | 43560 | - | GH38 |
| TF | HRGMv2_3783_12 | HRGMv2_3783_12_41 | 43727 | 44458 | - | 0040266 |
| pfam | HRGMv2_3783_12 | HRGMv2_3783_12_42 | 44673 | 46655 | + | Hepar_II_III_C |
| CAZyme | HRGMv2_3783_12 | HRGMv2_3783_12_43 | 46849 | 49020 | - | CE20 |
| pfam | HRGMv2_3783_12 | HRGMv2_3783_12_44 | 49310 | 49888 | + | CelD_N |
| pfam | HRGMv2_3783_12 | HRGMv2_3783_12_45 | 49864 | 50586 | - | Pan_kinase |
| TC | HRGMv2_3783_12 | HRGMv2_3783_12_46 | 50592 | 51866 | - | 3.A.11.1.3 |
Gene ID: HRGMv2_3783_12_34
Type: CAZyme
Location: 32664 - 35072 (-)
Type: CAZyme
Location: 32664 - 35072 (-)
Gene ID: HRGMv2_3783_12_35
Type: CAZyme
Location: 35312 - 38314 (+)
Type: CAZyme
Location: 35312 - 38314 (+)
Gene ID: HRGMv2_3783_12_36
Type:
Location: 38329 - 39057 (+)
Type:
Location: 38329 - 39057 (+)
Gene ID: HRGMv2_3783_12_37
Type: CAZyme
Location: 39071 - 40216 (+)
Type: CAZyme
Location: 39071 - 40216 (+)
Gene ID: HRGMv2_3783_12_38
Type: pfam
Location: 40299 - 40946 (-)
Type: pfam
Location: 40299 - 40946 (-)
Gene ID: HRGMv2_3783_12_39
Type:
Location: 40943 - 41035 (-)
Type:
Location: 40943 - 41035 (-)
Gene ID: HRGMv2_3783_12_40
Type: CAZyme
Location: 41032 - 43560 (-)
Type: CAZyme
Location: 41032 - 43560 (-)
Gene ID: HRGMv2_3783_12_41
Type: TF
Location: 43727 - 44458 (-)
Type: TF
Location: 43727 - 44458 (-)
Gene ID: HRGMv2_3783_12_42
Type: pfam
Location: 44673 - 46655 (+)
Type: pfam
Location: 44673 - 46655 (+)
Gene ID: HRGMv2_3783_12_43
Type: CAZyme
Location: 46849 - 49020 (-)
Type: CAZyme
Location: 46849 - 49020 (-)
Gene ID: HRGMv2_3783_12_44
Type: pfam
Location: 49310 - 49888 (+)
Type: pfam
Location: 49310 - 49888 (+)
Gene ID: HRGMv2_3783_12_45
Type: pfam
Location: 49864 - 50586 (-)
Type: pfam
Location: 49864 - 50586 (-)
Gene ID: HRGMv2_3783_12_46
Type: TC
Location: 50592 - 51866 (-)
Type: TC
Location: 50592 - 51866 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
UBA1829
Genus
UBA1829
Species
UBA1829 sp900760615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.