Cluster: HRGMv2_3783_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3783
- CGC Family ID: CGCFAM_03366
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3783_10 | HRGMv2_3783_10_74 | 92304 | 93779 | + | GH20 |
| NULL(UNKNOWN) | HRGMv2_3783_10 | HRGMv2_3783_10_75 | 93897 | 94733 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3783_10 | HRGMv2_3783_10_76 | 94755 | 97916 | + | GH39 |
| TF | HRGMv2_3783_10 | HRGMv2_3783_10_77 | 98312 | 98782 | + | MarR |
| TC | HRGMv2_3783_10 | HRGMv2_3783_10_78 | 98784 | 99881 | + | 2.A.6.2.44 |
| TC | HRGMv2_3783_10 | HRGMv2_3783_10_79 | 99891 | 103010 | + | 2.A.6.2.16 |
Gene ID: HRGMv2_3783_10_74
Type: CAZyme
Location: 92304 - 93779 (+)
Type: CAZyme
Location: 92304 - 93779 (+)
Gene ID: HRGMv2_3783_10_75
Type:
Location: 93897 - 94733 (+)
Type:
Location: 93897 - 94733 (+)
Gene ID: HRGMv2_3783_10_76
Type: CAZyme
Location: 94755 - 97916 (+)
Type: CAZyme
Location: 94755 - 97916 (+)
Gene ID: HRGMv2_3783_10_77
Type: TF
Location: 98312 - 98782 (+)
Type: TF
Location: 98312 - 98782 (+)
Gene ID: HRGMv2_3783_10_78
Type: TC
Location: 98784 - 99881 (+)
Type: TC
Location: 98784 - 99881 (+)
Gene ID: HRGMv2_3783_10_79
Type: TC
Location: 99891 - 103010 (+)
Type: TC
Location: 99891 - 103010 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
UBA1829
Genus
UBA1829
Species
UBA1829 sp900760615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.