dbCAN Logo

Cluster: HRGMv2_3783_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3783_4 HRGMv2_3783_4_66 82368 84275 - 1.A.33.1.2
TC HRGMv2_3783_4 HRGMv2_3783_4_67 84586 85908 + 1.A.23.4.2
NULL(UNKNOWN) HRGMv2_3783_4 HRGMv2_3783_4_68 85949 86944 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3783_4 HRGMv2_3783_4_69 86941 87981 + 8.A.1.1.4
TC HRGMv2_3783_4 HRGMv2_3783_4_70 87994 89550 + 3.A.1.114.1
TC HRGMv2_3783_4 HRGMv2_3783_4_71 89519 90880 - 2.A.40.7.4
NULL(UNKNOWN) HRGMv2_3783_4 HRGMv2_3783_4_72 91019 91342 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3783_4 HRGMv2_3783_4_73 91346 91996 + 2.A.53.3.8
pfam HRGMv2_3783_4 HRGMv2_3783_4_74 91993 92772 + TrmO_N
CAZyme HRGMv2_3783_4 HRGMv2_3783_4_75 92765 93763 + GT2
TF HRGMv2_3783_4 HRGMv2_3783_4_76 93730 94311 - HTH_3
TF HRGMv2_3783_4 HRGMv2_3783_4_77 94504 94947 - MarR
TC HRGMv2_3783_4 HRGMv2_3783_4_78 95153 96259 + 2.A.6.2.44
TC HRGMv2_3783_4 HRGMv2_3783_4_79 96267 98078 + 2.A.6.2.16
TC HRGMv2_3783_4 HRGMv2_3783_4_80 98106 99425 + 2.A.6.2.25
Gene ID: HRGMv2_3783_4_66
Type: TC
Location: 82368 - 84275 (-)
Gene ID: HRGMv2_3783_4_67
Type: TC
Location: 84586 - 85908 (+)
Gene ID: HRGMv2_3783_4_68
Type:
Location: 85949 - 86944 (+)
Gene ID: HRGMv2_3783_4_69
Type: TC
Location: 86941 - 87981 (+)
Gene ID: HRGMv2_3783_4_70
Type: TC
Location: 87994 - 89550 (+)
Gene ID: HRGMv2_3783_4_71
Type: TC
Location: 89519 - 90880 (-)
Gene ID: HRGMv2_3783_4_72
Type:
Location: 91019 - 91342 (+)
Gene ID: HRGMv2_3783_4_73
Type: TC
Location: 91346 - 91996 (+)
Gene ID: HRGMv2_3783_4_74
Type: pfam
Location: 91993 - 92772 (+)
Gene ID: HRGMv2_3783_4_75
Type: CAZyme
Location: 92765 - 93763 (+)
Gene ID: HRGMv2_3783_4_76
Type: TF
Location: 93730 - 94311 (-)
Gene ID: HRGMv2_3783_4_77
Type: TF
Location: 94504 - 94947 (-)
Gene ID: HRGMv2_3783_4_78
Type: TC
Location: 95153 - 96259 (+)
Gene ID: HRGMv2_3783_4_79
Type: TC
Location: 96267 - 98078 (+)
Gene ID: HRGMv2_3783_4_80
Type: TC
Location: 98106 - 99425 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List