dbCAN HGM

Cluster: HRGMv2_3780_CGC9

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_3780_1	HRGMv2_3780_1_391	462250	464136	+	GH36
TC	HRGMv2_3780_1	HRGMv2_3780_1_392	464205	465800	-	2.A.22.5.3
CAZyme	HRGMv2_3780_1	HRGMv2_3780_1_393	466007	467071	+	GT2
CAZyme	HRGMv2_3780_1	HRGMv2_3780_1_394	467072	469225	-	CBM67 \| GH78
CAZyme	HRGMv2_3780_1	HRGMv2_3780_1_395	469417	470391	+	GT2
TF	HRGMv2_3780_1	HRGMv2_3780_1_396	470640	471695	+	GntR
pfam	HRGMv2_3780_1	HRGMv2_3780_1_397	471755	472477	+	N_methyl
CAZyme	HRGMv2_3780_1	HRGMv2_3780_1_398	472502	475795	+	GH148 \| GH148
CAZyme	HRGMv2_3780_1	HRGMv2_3780_1_399	476001	479318	+	GH148

Gene ID: HRGMv2_3780_1_391
Type: CAZyme
Location: 462250 - 464136 (+)

Gene ID: HRGMv2_3780_1_392
Type: TC
Location: 464205 - 465800 (-)

Gene ID: HRGMv2_3780_1_393
Type: CAZyme
Location: 466007 - 467071 (+)

Gene ID: HRGMv2_3780_1_394
Type: CAZyme
Location: 467072 - 469225 (-)

Gene ID: HRGMv2_3780_1_395
Type: CAZyme
Location: 469417 - 470391 (+)

Gene ID: HRGMv2_3780_1_396
Type: TF
Location: 470640 - 471695 (+)

Gene ID: HRGMv2_3780_1_397
Type: pfam
Location: 471755 - 472477 (+)

Gene ID: HRGMv2_3780_1_398
Type: CAZyme
Location: 472502 - 475795 (+)

Gene ID: HRGMv2_3780_1_399
Type: CAZyme
Location: 476001 - 479318 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.