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Cluster: HRGMv2_3780_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3780_1 HRGMv2_3780_1_306 364118 365524 + AA7
pfam HRGMv2_3780_1 HRGMv2_3780_1_307 365596 367965 - Pect-lyase_RHGA_epim
NULL(UNKNOWN) HRGMv2_3780_1 HRGMv2_3780_1_308 367982 368785 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3780_1 HRGMv2_3780_1_309 368815 370728 - GH5_19
TF HRGMv2_3780_1 HRGMv2_3780_1_310 370810 371835 - GntR
TF HRGMv2_3780_1 HRGMv2_3780_1_311 372034 372615 + HTH_3
CAZyme HRGMv2_3780_1 HRGMv2_3780_1_312 372582 373580 - GT2
pfam HRGMv2_3780_1 HRGMv2_3780_1_313 373573 374352 - TrmO_N
TC HRGMv2_3780_1 HRGMv2_3780_1_314 374349 374999 - 2.A.53.3.8
NULL(UNKNOWN) HRGMv2_3780_1 HRGMv2_3780_1_315 375002 375325 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3780_1 HRGMv2_3780_1_316 375467 376828 + 2.A.40.7.2
TC HRGMv2_3780_1 HRGMv2_3780_1_317 376797 378353 - 3.A.1.114.1
TC HRGMv2_3780_1 HRGMv2_3780_1_318 378367 379407 - 8.A.1.1.4
NULL(UNKNOWN) HRGMv2_3780_1 HRGMv2_3780_1_319 379404 380399 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3780_1 HRGMv2_3780_1_320 380440 381810 - 1.A.23.4.2
TC HRGMv2_3780_1 HRGMv2_3780_1_321 382072 383979 + 1.A.33.1.2
Gene ID: HRGMv2_3780_1_306
Type: CAZyme
Location: 364118 - 365524 (+)
Gene ID: HRGMv2_3780_1_307
Type: pfam
Location: 365596 - 367965 (-)
Gene ID: HRGMv2_3780_1_308
Type:
Location: 367982 - 368785 (-)
Gene ID: HRGMv2_3780_1_309
Type: CAZyme
Location: 368815 - 370728 (-)
Gene ID: HRGMv2_3780_1_310
Type: TF
Location: 370810 - 371835 (-)
Gene ID: HRGMv2_3780_1_311
Type: TF
Location: 372034 - 372615 (+)
Gene ID: HRGMv2_3780_1_312
Type: CAZyme
Location: 372582 - 373580 (-)
Gene ID: HRGMv2_3780_1_313
Type: pfam
Location: 373573 - 374352 (-)
Gene ID: HRGMv2_3780_1_314
Type: TC
Location: 374349 - 374999 (-)
Gene ID: HRGMv2_3780_1_315
Type:
Location: 375002 - 375325 (-)
Gene ID: HRGMv2_3780_1_316
Type: TC
Location: 375467 - 376828 (+)
Gene ID: HRGMv2_3780_1_317
Type: TC
Location: 376797 - 378353 (-)
Gene ID: HRGMv2_3780_1_318
Type: TC
Location: 378367 - 379407 (-)
Gene ID: HRGMv2_3780_1_319
Type:
Location: 379404 - 380399 (-)
Gene ID: HRGMv2_3780_1_320
Type: TC
Location: 380440 - 381810 (-)
Gene ID: HRGMv2_3780_1_321
Type: TC
Location: 382072 - 383979 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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