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Cluster: HRGMv2_3780_CGC67

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3780_35 HRGMv2_3780_35_12 11626 13095 - GT5
peptidase HRGMv2_3780_35 HRGMv2_3780_35_13 13113 13988 - S54.UPW
TC HRGMv2_3780_35 HRGMv2_3780_35_14 14032 15276 - 9.B.174.1.1
pfam HRGMv2_3780_35 HRGMv2_3780_35_15 15291 15779 - dCMP_cyt_deam_1 | MafB19-deam
pfam HRGMv2_3780_35 HRGMv2_3780_35_16 15776 17062 - ThiC_Rad_SAM
CAZyme HRGMv2_3780_35 HRGMv2_3780_35_17 17071 18357 - GT30
peptidase HRGMv2_3780_35 HRGMv2_3780_35_18 18487 19551 - M20.UPW
TC HRGMv2_3780_35 HRGMv2_3780_35_19 19582 21936 - 2.A.16.2.2
Gene ID: HRGMv2_3780_35_12
Type: CAZyme
Location: 11626 - 13095 (-)
Gene ID: HRGMv2_3780_35_13
Type: peptidase
Location: 13113 - 13988 (-)
Gene ID: HRGMv2_3780_35_14
Type: TC
Location: 14032 - 15276 (-)
Gene ID: HRGMv2_3780_35_15
Type: pfam
Location: 15291 - 15779 (-)
Gene ID: HRGMv2_3780_35_16
Type: pfam
Location: 15776 - 17062 (-)
Gene ID: HRGMv2_3780_35_17
Type: CAZyme
Location: 17071 - 18357 (-)
Gene ID: HRGMv2_3780_35_18
Type: peptidase
Location: 18487 - 19551 (-)
Gene ID: HRGMv2_3780_35_19
Type: TC
Location: 19582 - 21936 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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