dbCAN Logo

Cluster: HRGMv2_3780_CGC65

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3780_33 HRGMv2_3780_33_32 31412 32533 + GH179
peptidase HRGMv2_3780_33 HRGMv2_3780_33_33 32623 34809 + U32.UPW
CAZyme HRGMv2_3780_33 HRGMv2_3780_33_34 34847 36331 + GH32
CAZyme HRGMv2_3780_33 HRGMv2_3780_33_35 36354 38129 - GH36
pfam HRGMv2_3780_33 HRGMv2_3780_33_36 38126 39184 - Radical_SAM
pfam HRGMv2_3780_33 HRGMv2_3780_33_37 39184 40251 - NAD_synthase | tRNA_Me_trans | tRNA_Me_trans_C | tRNA_Me_trans_M
TC HRGMv2_3780_33 HRGMv2_3780_33_38 40420 41667 + 1.A.23.4.5
TC HRGMv2_3780_33 HRGMv2_3780_33_39 41757 43715 - 3.A.1.120.6
Gene ID: HRGMv2_3780_33_32
Type: CAZyme
Location: 31412 - 32533 (+)
Gene ID: HRGMv2_3780_33_33
Type: peptidase
Location: 32623 - 34809 (+)
Gene ID: HRGMv2_3780_33_34
Type: CAZyme
Location: 34847 - 36331 (+)
Gene ID: HRGMv2_3780_33_35
Type: CAZyme
Location: 36354 - 38129 (-)
Gene ID: HRGMv2_3780_33_36
Type: pfam
Location: 38126 - 39184 (-)
Gene ID: HRGMv2_3780_33_37
Type: pfam
Location: 39184 - 40251 (-)
Gene ID: HRGMv2_3780_33_38
Type: TC
Location: 40420 - 41667 (+)
Gene ID: HRGMv2_3780_33_39
Type: TC
Location: 41757 - 43715 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List