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Cluster: HRGMv2_3780_CGC61

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3780_29 HRGMv2_3780_29_18 21273 21983 + GT2
TF HRGMv2_3780_29 HRGMv2_3780_29_19 22017 22871 - HTH_AraC
CAZyme HRGMv2_3780_29 HRGMv2_3780_29_20 23024 24076 + GH33
pfam HRGMv2_3780_29 HRGMv2_3780_29_21 24079 24975 + DHDPS
NULL(UNKNOWN) HRGMv2_3780_29 HRGMv2_3780_29_22 24993 25229 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3780_29 HRGMv2_3780_29_23 25336 26520 + 9.B.146.1.6
CAZyme HRGMv2_3780_29 HRGMv2_3780_29_24 26557 28698 - GH36
CAZyme HRGMv2_3780_29 HRGMv2_3780_29_25 28700 29662 - GH130_9
Gene ID: HRGMv2_3780_29_18
Type: CAZyme
Location: 21273 - 21983 (+)
Gene ID: HRGMv2_3780_29_19
Type: TF
Location: 22017 - 22871 (-)
Gene ID: HRGMv2_3780_29_20
Type: CAZyme
Location: 23024 - 24076 (+)
Gene ID: HRGMv2_3780_29_21
Type: pfam
Location: 24079 - 24975 (+)
Gene ID: HRGMv2_3780_29_22
Type:
Location: 24993 - 25229 (+)
Gene ID: HRGMv2_3780_29_23
Type: TC
Location: 25336 - 26520 (+)
Gene ID: HRGMv2_3780_29_24
Type: CAZyme
Location: 26557 - 28698 (-)
Gene ID: HRGMv2_3780_29_25
Type: CAZyme
Location: 28700 - 29662 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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