dbCAN Logo

Cluster: HRGMv2_3780_CGC60

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3780_28 HRGMv2_3780_28_38 47568 48530 - 3.A.1.2.13
TC HRGMv2_3780_28 HRGMv2_3780_28_39 48544 49518 - 3.A.1.2.15
TC HRGMv2_3780_28 HRGMv2_3780_28_40 49499 50968 - 3.A.1.2.13
TC HRGMv2_3780_28 HRGMv2_3780_28_41 50983 51816 - 3.A.1.132.3
pfam HRGMv2_3780_28 HRGMv2_3780_28_42 51838 52329 - CTP_transf_like
NULL(UNKNOWN) HRGMv2_3780_28 HRGMv2_3780_28_43 52329 52886 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3780_28 HRGMv2_3780_28_44 53035 54210 + 2.A.21.9.1
TF HRGMv2_3780_28 HRGMv2_3780_28_45 54207 55562 + HTH_8
CAZyme HRGMv2_3780_28 HRGMv2_3780_28_46 55565 57373 + GH20
Gene ID: HRGMv2_3780_28_38
Type: TC
Location: 47568 - 48530 (-)
Gene ID: HRGMv2_3780_28_39
Type: TC
Location: 48544 - 49518 (-)
Gene ID: HRGMv2_3780_28_40
Type: TC
Location: 49499 - 50968 (-)
Gene ID: HRGMv2_3780_28_41
Type: TC
Location: 50983 - 51816 (-)
Gene ID: HRGMv2_3780_28_42
Type: pfam
Location: 51838 - 52329 (-)
Gene ID: HRGMv2_3780_28_43
Type:
Location: 52329 - 52886 (-)
Gene ID: HRGMv2_3780_28_44
Type: TC
Location: 53035 - 54210 (+)
Gene ID: HRGMv2_3780_28_45
Type: TF
Location: 54207 - 55562 (+)
Gene ID: HRGMv2_3780_28_46
Type: CAZyme
Location: 55565 - 57373 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List