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Cluster: HRGMv2_3780_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3780_26 HRGMv2_3780_26_20 19938 21461 - GH13
NULL(UNKNOWN) HRGMv2_3780_26 HRGMv2_3780_26_21 21483 22217 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_3780_26 HRGMv2_3780_26_22 22262 23269 - GntR
CAZyme HRGMv2_3780_26 HRGMv2_3780_26_23 23442 26075 - GH38
TF HRGMv2_3780_26 HRGMv2_3780_26_24 26173 27033 - HTH_AraC
peptidase HRGMv2_3780_26 HRGMv2_3780_26_25 27136 27939 - S09.UPW
CAZyme HRGMv2_3780_26 HRGMv2_3780_26_26 28111 29280 - GT19
TC HRGMv2_3780_26 HRGMv2_3780_26_27 29287 30705 - 3.A.5.1.1
Gene ID: HRGMv2_3780_26_20
Type: CAZyme
Location: 19938 - 21461 (-)
Gene ID: HRGMv2_3780_26_21
Type:
Location: 21483 - 22217 (-)
Gene ID: HRGMv2_3780_26_22
Type: TF
Location: 22262 - 23269 (-)
Gene ID: HRGMv2_3780_26_23
Type: CAZyme
Location: 23442 - 26075 (-)
Gene ID: HRGMv2_3780_26_24
Type: TF
Location: 26173 - 27033 (-)
Gene ID: HRGMv2_3780_26_25
Type: peptidase
Location: 27136 - 27939 (-)
Gene ID: HRGMv2_3780_26_26
Type: CAZyme
Location: 28111 - 29280 (-)
Gene ID: HRGMv2_3780_26_27
Type: TC
Location: 29287 - 30705 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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