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Cluster: HRGMv2_3780_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3780_12 HRGMv2_3780_12_52 62062 64005 - GT111 | GT2
CAZyme HRGMv2_3780_12 HRGMv2_3780_12_53 64016 65977 - GT111 | GT2
CAZyme HRGMv2_3780_12 HRGMv2_3780_12_54 65967 67313 - GT2
CAZyme HRGMv2_3780_12 HRGMv2_3780_12_55 67327 68538 - GT2
CAZyme HRGMv2_3780_12 HRGMv2_3780_12_56 68568 69692 - GT2
NULL(UNKNOWN) HRGMv2_3780_12 HRGMv2_3780_12_57 69748 70887 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3780_12 HRGMv2_3780_12_58 70887 72176 - 3.A.1.103.6
TC HRGMv2_3780_12 HRGMv2_3780_12_59 72166 73008 - 3.A.1.103.6
CAZyme HRGMv2_3780_12 HRGMv2_3780_12_60 73281 74390 + GT2
Gene ID: HRGMv2_3780_12_52
Type: CAZyme
Location: 62062 - 64005 (-)
Gene ID: HRGMv2_3780_12_53
Type: CAZyme
Location: 64016 - 65977 (-)
Gene ID: HRGMv2_3780_12_54
Type: CAZyme
Location: 65967 - 67313 (-)
Gene ID: HRGMv2_3780_12_55
Type: CAZyme
Location: 67327 - 68538 (-)
Gene ID: HRGMv2_3780_12_56
Type: CAZyme
Location: 68568 - 69692 (-)
Gene ID: HRGMv2_3780_12_57
Type:
Location: 69748 - 70887 (-)
Gene ID: HRGMv2_3780_12_58
Type: TC
Location: 70887 - 72176 (-)
Gene ID: HRGMv2_3780_12_59
Type: TC
Location: 72166 - 73008 (-)
Gene ID: HRGMv2_3780_12_60
Type: CAZyme
Location: 73281 - 74390 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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