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Cluster: HRGMv2_3780_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3780_9 HRGMv2_3780_9_37 41521 44826 + GH148
NULL(UNKNOWN) HRGMv2_3780_9 HRGMv2_3780_9_38 44991 46121 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_3780_9 HRGMv2_3780_9_39 46689 47102 - 0038966
TC HRGMv2_3780_9 HRGMv2_3780_9_40 47447 50566 - 2.A.6.2.16
TC HRGMv2_3780_9 HRGMv2_3780_9_41 50576 51673 - 2.A.6.2.44
TF HRGMv2_3780_9 HRGMv2_3780_9_42 51696 52145 - MarR
CAZyme HRGMv2_3780_9 HRGMv2_3780_9_43 52552 55713 - GH39
NULL(UNKNOWN) HRGMv2_3780_9 HRGMv2_3780_9_44 55740 56576 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3780_9 HRGMv2_3780_9_45 56694 58169 - GH20
Gene ID: HRGMv2_3780_9_37
Type: CAZyme
Location: 41521 - 44826 (+)
Gene ID: HRGMv2_3780_9_38
Type:
Location: 44991 - 46121 (-)
Gene ID: HRGMv2_3780_9_39
Type: TF
Location: 46689 - 47102 (-)
Gene ID: HRGMv2_3780_9_40
Type: TC
Location: 47447 - 50566 (-)
Gene ID: HRGMv2_3780_9_41
Type: TC
Location: 50576 - 51673 (-)
Gene ID: HRGMv2_3780_9_42
Type: TF
Location: 51696 - 52145 (-)
Gene ID: HRGMv2_3780_9_43
Type: CAZyme
Location: 52552 - 55713 (-)
Gene ID: HRGMv2_3780_9_44
Type:
Location: 55740 - 56576 (-)
Gene ID: HRGMv2_3780_9_45
Type: CAZyme
Location: 56694 - 58169 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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