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Cluster: HRGMv2_3780_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3780_1 HRGMv2_3780_1_96 110642 111379 + 1.B.42.1.2
TC HRGMv2_3780_1 HRGMv2_3780_1_97 111468 112634 - 9.B.160.1.10
pfam HRGMv2_3780_1 HRGMv2_3780_1_98 112756 113511 - adh_short | KR | adh_short_C2
CAZyme HRGMv2_3780_1 HRGMv2_3780_1_99 113526 114995 - GH10
pfam HRGMv2_3780_1 HRGMv2_3780_1_100 115010 115765 - RraA-like
peptidase HRGMv2_3780_1 HRGMv2_3780_1_101 115794 116831 - S12.UPW
CAZyme HRGMv2_3780_1 HRGMv2_3780_1_102 116840 118171 - GH10
Gene ID: HRGMv2_3780_1_96
Type: TC
Location: 110642 - 111379 (+)
Gene ID: HRGMv2_3780_1_97
Type: TC
Location: 111468 - 112634 (-)
Gene ID: HRGMv2_3780_1_98
Type: pfam
Location: 112756 - 113511 (-)
Gene ID: HRGMv2_3780_1_99
Type: CAZyme
Location: 113526 - 114995 (-)
Gene ID: HRGMv2_3780_1_100
Type: pfam
Location: 115010 - 115765 (-)
Gene ID: HRGMv2_3780_1_101
Type: peptidase
Location: 115794 - 116831 (-)
Gene ID: HRGMv2_3780_1_102
Type: CAZyme
Location: 116840 - 118171 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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