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Cluster: HRGMv2_3777_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3777_14 HRGMv2_3777_14_9 12535 14952 + GH163
CAZyme HRGMv2_3777_14 HRGMv2_3777_14_10 14965 17493 + GH163
NULL(UNKNOWN) HRGMv2_3777_14 HRGMv2_3777_14_11 17515 18423 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3777_14 HRGMv2_3777_14_12 18492 20036 - GH78
CAZyme HRGMv2_3777_14 HRGMv2_3777_14_13 20080 23010 - CBM67
NULL(UNKNOWN) HRGMv2_3777_14 HRGMv2_3777_14_14 23030 23782 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_3777_14 HRGMv2_3777_14_15 23941 24825 + HTH_AraC
TC HRGMv2_3777_14 HRGMv2_3777_14_16 24819 25463 - 2.A.53.3.8
TF HRGMv2_3777_14 HRGMv2_3777_14_17 25624 26514 - HTH_AraC
CAZyme HRGMv2_3777_14 HRGMv2_3777_14_18 26616 28085 + GH2
Gene ID: HRGMv2_3777_14_9
Type: CAZyme
Location: 12535 - 14952 (+)
Gene ID: HRGMv2_3777_14_10
Type: CAZyme
Location: 14965 - 17493 (+)
Gene ID: HRGMv2_3777_14_11
Type:
Location: 17515 - 18423 (+)
Gene ID: HRGMv2_3777_14_12
Type: CAZyme
Location: 18492 - 20036 (-)
Gene ID: HRGMv2_3777_14_13
Type: CAZyme
Location: 20080 - 23010 (-)
Gene ID: HRGMv2_3777_14_14
Type:
Location: 23030 - 23782 (-)
Gene ID: HRGMv2_3777_14_15
Type: TF
Location: 23941 - 24825 (+)
Gene ID: HRGMv2_3777_14_16
Type: TC
Location: 24819 - 25463 (-)
Gene ID: HRGMv2_3777_14_17
Type: TF
Location: 25624 - 26514 (-)
Gene ID: HRGMv2_3777_14_18
Type: CAZyme
Location: 26616 - 28085 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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