Cluster: HRGMv2_3777_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3777
- CGC Family ID: CGCFAM_03679
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3777_90 | HRGMv2_3777_90_1 | 2 | 2347 | - | CBM67 | GH78 |
| TF | HRGMv2_3777_90 | HRGMv2_3777_90_2 | 2344 | 3435 | - | GntR |
| NULL(UNKNOWN) | HRGMv2_3777_90 | HRGMv2_3777_90_3 | 3456 | 4031 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3777_90 | HRGMv2_3777_90_4 | 4229 | 6043 | + | 3.B.1.1.1 |
| TC | HRGMv2_3777_90 | HRGMv2_3777_90_5 | 6058 | 7302 | + | 3.B.1.1.4 |
Gene ID: HRGMv2_3777_90_1
Type: CAZyme
Location: 2 - 2347 (-)
Type: CAZyme
Location: 2 - 2347 (-)
Gene ID: HRGMv2_3777_90_2
Type: TF
Location: 2344 - 3435 (-)
Type: TF
Location: 2344 - 3435 (-)
Gene ID: HRGMv2_3777_90_3
Type:
Location: 3456 - 4031 (+)
Type:
Location: 3456 - 4031 (+)
Gene ID: HRGMv2_3777_90_4
Type: TC
Location: 4229 - 6043 (+)
Type: TC
Location: 4229 - 6043 (+)
Gene ID: HRGMv2_3777_90_5
Type: TC
Location: 6058 - 7302 (+)
Type: TC
Location: 6058 - 7302 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
UBA1829
Genus
UBA11452
Species
UBA11452 sp019408975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.