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Cluster: HRGMv2_3777_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3777_55 HRGMv2_3777_55_8 5742 8141 + GH163
CAZyme HRGMv2_3777_55 HRGMv2_3777_55_9 8308 10350 + GH163
NULL(UNKNOWN) HRGMv2_3777_55 HRGMv2_3777_55_10 10347 10772 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3777_55 HRGMv2_3777_55_11 10790 13024 + GH13
CAZyme HRGMv2_3777_55 HRGMv2_3777_55_12 13028 15340 + GH89
pfam HRGMv2_3777_55 HRGMv2_3777_55_13 15367 16077 - Methyltrans_RNA
CAZyme HRGMv2_3777_55 HRGMv2_3777_55_14 16087 17214 - GT28
TC HRGMv2_3777_55 HRGMv2_3777_55_15 17227 18129 - 2.A.103.1.3
Gene ID: HRGMv2_3777_55_8
Type: CAZyme
Location: 5742 - 8141 (+)
Gene ID: HRGMv2_3777_55_9
Type: CAZyme
Location: 8308 - 10350 (+)
Gene ID: HRGMv2_3777_55_10
Type:
Location: 10347 - 10772 (+)
Gene ID: HRGMv2_3777_55_11
Type: CAZyme
Location: 10790 - 13024 (+)
Gene ID: HRGMv2_3777_55_12
Type: CAZyme
Location: 13028 - 15340 (+)
Gene ID: HRGMv2_3777_55_13
Type: pfam
Location: 15367 - 16077 (-)
Gene ID: HRGMv2_3777_55_14
Type: CAZyme
Location: 16087 - 17214 (-)
Gene ID: HRGMv2_3777_55_15
Type: TC
Location: 17227 - 18129 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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