Cluster: HRGMv2_3777_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3777
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3777_24 | HRGMv2_3777_24_6 | 4615 | 6951 | - | 9.B.106.2.2 |
| STP | HRGMv2_3777_24 | HRGMv2_3777_24_7 | 6948 | 10388 | - | GAF | HATPase_c | HisKA | PAS | Response_reg |
| pfam | HRGMv2_3777_24 | HRGMv2_3777_24_8 | 10360 | 11592 | - | ABC_sub_bind |
| TC | HRGMv2_3777_24 | HRGMv2_3777_24_9 | 11881 | 12336 | - | 4.A.2.1.4 |
| TF | HRGMv2_3777_24 | HRGMv2_3777_24_10 | 12917 | 13666 | + | TrmB |
| pfam | HRGMv2_3777_24 | HRGMv2_3777_24_11 | 13697 | 14953 | + | FAD_binding_2 | GIDA | FAD_oxidored | FAD_oxidored | NAD_binding_8 |
| CAZyme | HRGMv2_3777_24 | HRGMv2_3777_24_12 | 14996 | 16765 | - | GH36 |
Gene ID: HRGMv2_3777_24_6
Type: TC
Location: 4615 - 6951 (-)
Type: TC
Location: 4615 - 6951 (-)
Gene ID: HRGMv2_3777_24_7
Type: STP
Location: 6948 - 10388 (-)
Type: STP
Location: 6948 - 10388 (-)
Gene ID: HRGMv2_3777_24_8
Type: pfam
Location: 10360 - 11592 (-)
Type: pfam
Location: 10360 - 11592 (-)
Gene ID: HRGMv2_3777_24_9
Type: TC
Location: 11881 - 12336 (-)
Type: TC
Location: 11881 - 12336 (-)
Gene ID: HRGMv2_3777_24_10
Type: TF
Location: 12917 - 13666 (+)
Type: TF
Location: 12917 - 13666 (+)
Gene ID: HRGMv2_3777_24_11
Type: pfam
Location: 13697 - 14953 (+)
Type: pfam
Location: 13697 - 14953 (+)
Gene ID: HRGMv2_3777_24_12
Type: CAZyme
Location: 14996 - 16765 (-)
Type: CAZyme
Location: 14996 - 16765 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
UBA1829
Genus
UBA11452
Species
UBA11452 sp019408975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.