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Cluster: HRGMv2_3767_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3767_3 HRGMv2_3767_3_70 74625 74867 - 3.D.1.6.4
pfam HRGMv2_3767_3 HRGMv2_3767_3_71 75001 75729 - Pan_kinase
CAZyme HRGMv2_3767_3 HRGMv2_3767_3_72 75735 76862 - GT28
pfam HRGMv2_3767_3 HRGMv2_3767_3_73 77258 78202 + Formyl_trans_N | Formyl_trans_C
pfam HRGMv2_3767_3 HRGMv2_3767_3_74 78203 80209 + UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2
TC HRGMv2_3767_3 HRGMv2_3767_3_75 80532 82826 - 2.A.21.3.2
pfam HRGMv2_3767_3 HRGMv2_3767_3_76 82839 84017 - GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg
TC HRGMv2_3767_3 HRGMv2_3767_3_77 84249 85625 - 9.B.18.1.2
Gene ID: HRGMv2_3767_3_70
Type: TC
Location: 74625 - 74867 (-)
Gene ID: HRGMv2_3767_3_71
Type: pfam
Location: 75001 - 75729 (-)
Gene ID: HRGMv2_3767_3_72
Type: CAZyme
Location: 75735 - 76862 (-)
Gene ID: HRGMv2_3767_3_73
Type: pfam
Location: 77258 - 78202 (+)
Gene ID: HRGMv2_3767_3_74
Type: pfam
Location: 78203 - 80209 (+)
Gene ID: HRGMv2_3767_3_75
Type: TC
Location: 80532 - 82826 (-)
Gene ID: HRGMv2_3767_3_76
Type: pfam
Location: 82839 - 84017 (-)
Gene ID: HRGMv2_3767_3_77
Type: TC
Location: 84249 - 85625 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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