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Cluster: HRGMv2_3767_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3767_2 HRGMv2_3767_2_109 148200 150059 + GH77
pfam HRGMv2_3767_2 HRGMv2_3767_2_110 150165 151169 + MTS | PrmA | Methyltransf_11 | Methyltransf_25 | Methyltransf_31
pfam HRGMv2_3767_2 HRGMv2_3767_2_111 151424 152026 - Lum_binding | Lum_binding
TC HRGMv2_3767_2 HRGMv2_3767_2_112 152051 153685 - 2.A.111.2.1
CAZyme HRGMv2_3767_2 HRGMv2_3767_2_113 153858 155330 + CE4
TC HRGMv2_3767_2 HRGMv2_3767_2_114 155873 157117 + 3.D.1.5.1
TC HRGMv2_3767_2 HRGMv2_3767_2_115 157167 157748 + 3.D.1.3.1
TC HRGMv2_3767_2 HRGMv2_3767_2_116 157781 159181 + 3.D.1.3.1
TC HRGMv2_3767_2 HRGMv2_3767_2_117 159233 160969 + 3.D.1.6.3
TC HRGMv2_3767_2 HRGMv2_3767_2_118 161005 162273 + 3.D.1.5.1
STP HRGMv2_3767_2 HRGMv2_3767_2_119 162307 162870 + Fer4 | Fer4
TC HRGMv2_3767_2 HRGMv2_3767_2_120 162907 163656 + 3.D.1.1.1
TC HRGMv2_3767_2 HRGMv2_3767_2_121 163685 164002 + 3.D.1.3.1
TC HRGMv2_3767_2 HRGMv2_3767_2_122 164026 165858 + 3.D.1.3.1
TC HRGMv2_3767_2 HRGMv2_3767_2_123 165880 167304 + 3.D.1.5.1
TC HRGMv2_3767_2 HRGMv2_3767_2_124 167353 168735 + 3.D.1.5.1
Gene ID: HRGMv2_3767_2_109
Type: CAZyme
Location: 148200 - 150059 (+)
Gene ID: HRGMv2_3767_2_110
Type: pfam
Location: 150165 - 151169 (+)
Gene ID: HRGMv2_3767_2_111
Type: pfam
Location: 151424 - 152026 (-)
Gene ID: HRGMv2_3767_2_112
Type: TC
Location: 152051 - 153685 (-)
Gene ID: HRGMv2_3767_2_113
Type: CAZyme
Location: 153858 - 155330 (+)
Gene ID: HRGMv2_3767_2_114
Type: TC
Location: 155873 - 157117 (+)
Gene ID: HRGMv2_3767_2_115
Type: TC
Location: 157167 - 157748 (+)
Gene ID: HRGMv2_3767_2_116
Type: TC
Location: 157781 - 159181 (+)
Gene ID: HRGMv2_3767_2_117
Type: TC
Location: 159233 - 160969 (+)
Gene ID: HRGMv2_3767_2_118
Type: TC
Location: 161005 - 162273 (+)
Gene ID: HRGMv2_3767_2_119
Type: STP
Location: 162307 - 162870 (+)
Gene ID: HRGMv2_3767_2_120
Type: TC
Location: 162907 - 163656 (+)
Gene ID: HRGMv2_3767_2_121
Type: TC
Location: 163685 - 164002 (+)
Gene ID: HRGMv2_3767_2_122
Type: TC
Location: 164026 - 165858 (+)
Gene ID: HRGMv2_3767_2_123
Type: TC
Location: 165880 - 167304 (+)
Gene ID: HRGMv2_3767_2_124
Type: TC
Location: 167353 - 168735 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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