dbCAN Logo

Cluster: HRGMv2_3767_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3767_15 HRGMv2_3767_15_19 20869 21660 + 1.A.30.2.9
pfam HRGMv2_3767_15 HRGMv2_3767_15_20 21701 22147 + ExbD
pfam HRGMv2_3767_15 HRGMv2_3767_15_21 22144 24576 + TPR_6 | TPR_8 | TPR_16 | TPR_16 | TPR_16 | TPR_16
CAZyme HRGMv2_3767_15 HRGMv2_3767_15_22 24601 26394 + GT51
pfam HRGMv2_3767_15 HRGMv2_3767_15_23 26423 27187 + Inositol_P
pfam HRGMv2_3767_15 HRGMv2_3767_15_24 27209 27718 + YgbB
TC HRGMv2_3767_15 HRGMv2_3767_15_25 28526 30424 - 2.A.9.3.7
Gene ID: HRGMv2_3767_15_19
Type: TC
Location: 20869 - 21660 (+)
Gene ID: HRGMv2_3767_15_20
Type: pfam
Location: 21701 - 22147 (+)
Gene ID: HRGMv2_3767_15_21
Type: pfam
Location: 22144 - 24576 (+)
Gene ID: HRGMv2_3767_15_22
Type: CAZyme
Location: 24601 - 26394 (+)
Gene ID: HRGMv2_3767_15_23
Type: pfam
Location: 26423 - 27187 (+)
Gene ID: HRGMv2_3767_15_24
Type: pfam
Location: 27209 - 27718 (+)
Gene ID: HRGMv2_3767_15_25
Type: TC
Location: 28526 - 30424 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List