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Cluster: HRGMv2_3767_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3767_8 HRGMv2_3767_8_59 78110 78859 - 3.A.1.3.15
TC HRGMv2_3767_8 HRGMv2_3767_8_60 78852 80336 - 3.A.1.3.17
CAZyme HRGMv2_3767_8 HRGMv2_3767_8_61 80499 81569 - GT2
pfam HRGMv2_3767_8 HRGMv2_3767_8_62 82080 83141 + EpsG
CAZyme HRGMv2_3767_8 HRGMv2_3767_8_63 83138 84256 + GT4
TC HRGMv2_3767_8 HRGMv2_3767_8_64 84253 84864 + 9.B.18.1.2
pfam HRGMv2_3767_8 HRGMv2_3767_8_65 84861 86648 + Aminotran_1_2 | DegT_DnrJ_EryC1 | Beta_elim_lyase | PglD_N
TC HRGMv2_3767_8 HRGMv2_3767_8_66 86660 88645 + 9.B.18.2.1
TC HRGMv2_3767_8 HRGMv2_3767_8_67 88664 89449 + 1.B.18.3.8
TC HRGMv2_3767_8 HRGMv2_3767_8_68 89454 91835 + 8.A.3.3.4
CAZyme HRGMv2_3767_8 HRGMv2_3767_8_69 91856 92989 + GT4
CAZyme HRGMv2_3767_8 HRGMv2_3767_8_70 92986 94134 + GT4
CAZyme HRGMv2_3767_8 HRGMv2_3767_8_71 94141 95148 + GT2
pfam HRGMv2_3767_8 HRGMv2_3767_8_72 95160 96323 + PS_pyruv_trans
CAZyme HRGMv2_3767_8 HRGMv2_3767_8_73 96320 97510 + GH105
NULL(UNKNOWN) HRGMv2_3767_8 HRGMv2_3767_8_74 97507 99021 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3767_8 HRGMv2_3767_8_75 99048 100205 + GT4
CAZyme HRGMv2_3767_8 HRGMv2_3767_8_76 100208 101323 + GT4
CAZyme HRGMv2_3767_8 HRGMv2_3767_8_77 101320 102360 + GT2
CAZyme HRGMv2_3767_8 HRGMv2_3767_8_78 102357 103475 + GT4
CAZyme HRGMv2_3767_8 HRGMv2_3767_8_79 103472 104371 + GT2
CAZyme HRGMv2_3767_8 HRGMv2_3767_8_80 104368 105528 + GT4
CAZyme HRGMv2_3767_8 HRGMv2_3767_8_81 105547 106614 + GT2
pfam HRGMv2_3767_8 HRGMv2_3767_8_82 106589 107251 - RVP | Asp_protease_2 | gag-asp_proteas
TF HRGMv2_3767_8 HRGMv2_3767_8_83 107415 108311 - HTH_AraC
TC HRGMv2_3767_8 HRGMv2_3767_8_84 108541 109566 + 8.A.5.1.3
Gene ID: HRGMv2_3767_8_59
Type: TC
Location: 78110 - 78859 (-)
Gene ID: HRGMv2_3767_8_60
Type: TC
Location: 78852 - 80336 (-)
Gene ID: HRGMv2_3767_8_61
Type: CAZyme
Location: 80499 - 81569 (-)
Gene ID: HRGMv2_3767_8_62
Type: pfam
Location: 82080 - 83141 (+)
Gene ID: HRGMv2_3767_8_63
Type: CAZyme
Location: 83138 - 84256 (+)
Gene ID: HRGMv2_3767_8_64
Type: TC
Location: 84253 - 84864 (+)
Gene ID: HRGMv2_3767_8_65
Type: pfam
Location: 84861 - 86648 (+)
Gene ID: HRGMv2_3767_8_66
Type: TC
Location: 86660 - 88645 (+)
Gene ID: HRGMv2_3767_8_67
Type: TC
Location: 88664 - 89449 (+)
Gene ID: HRGMv2_3767_8_68
Type: TC
Location: 89454 - 91835 (+)
Gene ID: HRGMv2_3767_8_69
Type: CAZyme
Location: 91856 - 92989 (+)
Gene ID: HRGMv2_3767_8_70
Type: CAZyme
Location: 92986 - 94134 (+)
Gene ID: HRGMv2_3767_8_71
Type: CAZyme
Location: 94141 - 95148 (+)
Gene ID: HRGMv2_3767_8_72
Type: pfam
Location: 95160 - 96323 (+)
Gene ID: HRGMv2_3767_8_73
Type: CAZyme
Location: 96320 - 97510 (+)
Gene ID: HRGMv2_3767_8_74
Type:
Location: 97507 - 99021 (+)
Gene ID: HRGMv2_3767_8_75
Type: CAZyme
Location: 99048 - 100205 (+)
Gene ID: HRGMv2_3767_8_76
Type: CAZyme
Location: 100208 - 101323 (+)
Gene ID: HRGMv2_3767_8_77
Type: CAZyme
Location: 101320 - 102360 (+)
Gene ID: HRGMv2_3767_8_78
Type: CAZyme
Location: 102357 - 103475 (+)
Gene ID: HRGMv2_3767_8_79
Type: CAZyme
Location: 103472 - 104371 (+)
Gene ID: HRGMv2_3767_8_80
Type: CAZyme
Location: 104368 - 105528 (+)
Gene ID: HRGMv2_3767_8_81
Type: CAZyme
Location: 105547 - 106614 (+)
Gene ID: HRGMv2_3767_8_82
Type: pfam
Location: 106589 - 107251 (-)
Gene ID: HRGMv2_3767_8_83
Type: TF
Location: 107415 - 108311 (-)
Gene ID: HRGMv2_3767_8_84
Type: TC
Location: 108541 - 109566 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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