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Cluster: HRGMv2_3767_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3767_4 HRGMv2_3767_4_85 106444 108060 + GH29
pfam HRGMv2_3767_4 HRGMv2_3767_4_86 108085 110469 + BRCT | DNA_ligase_aden | DNA_ligase_ZBD | DNA_ligase_OB | PTCB-BRCT | Nlig-Ia
TC HRGMv2_3767_4 HRGMv2_3767_4_87 110664 111272 + 4.F.1.1.8
NULL(UNKNOWN) HRGMv2_3767_4 HRGMv2_3767_4_88 111488 111961 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3767_4 HRGMv2_3767_4_89 112091 112708 - OMP_b-brl
TC HRGMv2_3767_4 HRGMv2_3767_4_90 113238 114527 + 1.I.1.1.3
NULL(UNKNOWN) HRGMv2_3767_4 HRGMv2_3767_4_91 114639 115247 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3767_4 HRGMv2_3767_4_92 115738 117183 + GH109
Gene ID: HRGMv2_3767_4_85
Type: CAZyme
Location: 106444 - 108060 (+)
Gene ID: HRGMv2_3767_4_86
Type: pfam
Location: 108085 - 110469 (+)
Gene ID: HRGMv2_3767_4_87
Type: TC
Location: 110664 - 111272 (+)
Gene ID: HRGMv2_3767_4_88
Type:
Location: 111488 - 111961 (-)
Gene ID: HRGMv2_3767_4_89
Type: pfam
Location: 112091 - 112708 (-)
Gene ID: HRGMv2_3767_4_90
Type: TC
Location: 113238 - 114527 (+)
Gene ID: HRGMv2_3767_4_91
Type:
Location: 114639 - 115247 (+)
Gene ID: HRGMv2_3767_4_92
Type: CAZyme
Location: 115738 - 117183 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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