Cluster: HRGMv2_3762_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3762
- CGC Family ID: CGCFAM_01068
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3762_35 | HRGMv2_3762_35_12 | 14501 | 15433 | + | 2.A.69.4.5 |
| CAZyme | HRGMv2_3762_35 | HRGMv2_3762_35_13 | 15539 | 16951 | - | AA4 |
| TC | HRGMv2_3762_35 | HRGMv2_3762_35_14 | 17009 | 17941 | - | 2.A.28.2.4 |
Gene ID: HRGMv2_3762_35_12
Type: TC
Location: 14501 - 15433 (+)
Type: TC
Location: 14501 - 15433 (+)
Gene ID: HRGMv2_3762_35_13
Type: CAZyme
Location: 15539 - 16951 (-)
Type: CAZyme
Location: 15539 - 16951 (-)
Gene ID: HRGMv2_3762_35_14
Type: TC
Location: 17009 - 17941 (-)
Type: TC
Location: 17009 - 17941 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.