Cluster: HRGMv2_3762_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3762
- CGC Family ID: CGCFAM_00314
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3762_32 | HRGMv2_3762_32_21 | 19366 | 20811 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_3762_32 | HRGMv2_3762_32_22 | 20827 | 21597 | + | GT111 |
| NULL(UNKNOWN) | HRGMv2_3762_32 | HRGMv2_3762_32_23 | 21652 | 22458 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3762_32 | HRGMv2_3762_32_24 | 22466 | 23140 | + | 3.A.1.103.1 |
Gene ID: HRGMv2_3762_32_21
Type: TC
Location: 19366 - 20811 (+)
Type: TC
Location: 19366 - 20811 (+)
Gene ID: HRGMv2_3762_32_22
Type: CAZyme
Location: 20827 - 21597 (+)
Type: CAZyme
Location: 20827 - 21597 (+)
Gene ID: HRGMv2_3762_32_23
Type:
Location: 21652 - 22458 (+)
Type:
Location: 21652 - 22458 (+)
Gene ID: HRGMv2_3762_32_24
Type: TC
Location: 22466 - 23140 (+)
Type: TC
Location: 22466 - 23140 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.