Cluster: HRGMv2_3762_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3762
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3762_4 | HRGMv2_3762_4_39 | 46130 | 46861 | + | GT26 |
| pfam | HRGMv2_3762_4 | HRGMv2_3762_4_40 | 46876 | 47514 | + | PS_Dcarbxylase |
| pfam | HRGMv2_3762_4 | HRGMv2_3762_4_41 | 47511 | 48185 | + | CDP-OH_P_transf |
| CAZyme | HRGMv2_3762_4 | HRGMv2_3762_4_42 | 48205 | 49455 | + | GT2 |
| pfam | HRGMv2_3762_4 | HRGMv2_3762_4_43 | 49458 | 50210 | + | SurE |
| TC | HRGMv2_3762_4 | HRGMv2_3762_4_44 | 50707 | 52095 | + | 2.A.25.1.4 |
Gene ID: HRGMv2_3762_4_39
Type: CAZyme
Location: 46130 - 46861 (+)
Type: CAZyme
Location: 46130 - 46861 (+)
Gene ID: HRGMv2_3762_4_40
Type: pfam
Location: 46876 - 47514 (+)
Type: pfam
Location: 46876 - 47514 (+)
Gene ID: HRGMv2_3762_4_41
Type: pfam
Location: 47511 - 48185 (+)
Type: pfam
Location: 47511 - 48185 (+)
Gene ID: HRGMv2_3762_4_42
Type: CAZyme
Location: 48205 - 49455 (+)
Type: CAZyme
Location: 48205 - 49455 (+)
Gene ID: HRGMv2_3762_4_43
Type: pfam
Location: 49458 - 50210 (+)
Type: pfam
Location: 49458 - 50210 (+)
Gene ID: HRGMv2_3762_4_44
Type: TC
Location: 50707 - 52095 (+)
Type: TC
Location: 50707 - 52095 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.