Cluster: HRGMv2_3762_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3762
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3762_58 | HRGMv2_3762_58_6 | 5746 | 7329 | + | 2.A.66.2.14 |
| pfam | HRGMv2_3762_58 | HRGMv2_3762_58_7 | 7359 | 8366 | + | PRA-PH | MazG | MazG |
| pfam | HRGMv2_3762_58 | HRGMv2_3762_58_8 | 8411 | 8689 | + | Bac_DNA_binding |
| CAZyme | HRGMv2_3762_58 | HRGMv2_3762_58_9 | 8799 | 9959 | + | GT28 |
| pfam | HRGMv2_3762_58 | HRGMv2_3762_58_10 | 10029 | 11399 | + | Polysacc_deac_2 |
| TC | HRGMv2_3762_58 | HRGMv2_3762_58_11 | 11411 | 12196 | + | 2.A.102.3.1 |
Gene ID: HRGMv2_3762_58_6
Type: TC
Location: 5746 - 7329 (+)
Type: TC
Location: 5746 - 7329 (+)
Gene ID: HRGMv2_3762_58_7
Type: pfam
Location: 7359 - 8366 (+)
Type: pfam
Location: 7359 - 8366 (+)
Gene ID: HRGMv2_3762_58_8
Type: pfam
Location: 8411 - 8689 (+)
Type: pfam
Location: 8411 - 8689 (+)
Gene ID: HRGMv2_3762_58_9
Type: CAZyme
Location: 8799 - 9959 (+)
Type: CAZyme
Location: 8799 - 9959 (+)
Gene ID: HRGMv2_3762_58_10
Type: pfam
Location: 10029 - 11399 (+)
Type: pfam
Location: 10029 - 11399 (+)
Gene ID: HRGMv2_3762_58_11
Type: TC
Location: 11411 - 12196 (+)
Type: TC
Location: 11411 - 12196 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.