Cluster: HRGMv2_3762_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3762
- CGC Family ID: CGCFAM_01389
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3762_49 | HRGMv2_3762_49_6 | 4618 | 6507 | + | 2.A.114.1.5 |
| pfam | HRGMv2_3762_49 | HRGMv2_3762_49_7 | 6644 | 7564 | + | Radical_SAM |
| CAZyme | HRGMv2_3762_49 | HRGMv2_3762_49_8 | 7657 | 9066 | - | AA4 |
Gene ID: HRGMv2_3762_49_6
Type: TC
Location: 4618 - 6507 (+)
Type: TC
Location: 4618 - 6507 (+)
Gene ID: HRGMv2_3762_49_7
Type: pfam
Location: 6644 - 7564 (+)
Type: pfam
Location: 6644 - 7564 (+)
Gene ID: HRGMv2_3762_49_8
Type: CAZyme
Location: 7657 - 9066 (-)
Type: CAZyme
Location: 7657 - 9066 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.