Cluster: HRGMv2_3762_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3762
- CGC Family ID: CGCFAM_00465
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3762_1 | HRGMv2_3762_1_12 | 11812 | 12225 | + | 2.A.7.2.1 |
| pfam | HRGMv2_3762_1 | HRGMv2_3762_1_13 | 12441 | 13373 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
| CAZyme | HRGMv2_3762_1 | HRGMv2_3762_1_14 | 13375 | 14940 | + | GT83 |
Gene ID: HRGMv2_3762_1_12
Type: TC
Location: 11812 - 12225 (+)
Type: TC
Location: 11812 - 12225 (+)
Gene ID: HRGMv2_3762_1_13
Type: pfam
Location: 12441 - 13373 (+)
Type: pfam
Location: 12441 - 13373 (+)
Gene ID: HRGMv2_3762_1_14
Type: CAZyme
Location: 13375 - 14940 (+)
Type: CAZyme
Location: 13375 - 14940 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.