Cluster: HRGMv2_3761_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3761
- CGC Family ID: CGCFAM_01997
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3761_4 | HRGMv2_3761_4_65 | 92905 | 93807 | - | 3.A.1.15.11 |
| TC | HRGMv2_3761_4 | HRGMv2_3761_4_66 | 93812 | 94600 | - | 3.A.1.15.3 |
| TC | HRGMv2_3761_4 | HRGMv2_3761_4_67 | 94587 | 95255 | - | 3.A.1.15.11 |
| CAZyme | HRGMv2_3761_4 | HRGMv2_3761_4_68 | 95551 | 97629 | + | GT51 |
Gene ID: HRGMv2_3761_4_65
Type: TC
Location: 92905 - 93807 (-)
Type: TC
Location: 92905 - 93807 (-)
Gene ID: HRGMv2_3761_4_66
Type: TC
Location: 93812 - 94600 (-)
Type: TC
Location: 93812 - 94600 (-)
Gene ID: HRGMv2_3761_4_67
Type: TC
Location: 94587 - 95255 (-)
Type: TC
Location: 94587 - 95255 (-)
Gene ID: HRGMv2_3761_4_68
Type: CAZyme
Location: 95551 - 97629 (+)
Type: CAZyme
Location: 95551 - 97629 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3761_4_65 | vegetarian > omnivore | 3.26866 | 0.00132 |
| HRGMv2_3761_4_65 | vegetarian > vegan | 4.24217 | 0.01878 |
| HRGMv2_3761_4_66 | vegetarian > omnivore | 1.11668 | 0.00132 |
| HRGMv2_3761_4_66 | vegetarian > vegan | 1.19860 | 0.01878 |
| HRGMv2_3761_4_68 | vegetarian > omnivore | 2.12114 | 0.00132 |
| HRGMv2_3761_4_68 | vegetarian > vegan | 1.40477 | 0.01878 |