Cluster: HRGMv2_3761_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3761
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3761_3 | HRGMv2_3761_3_127 | 135878 | 136474 | + | GH23 |
| NULL(UNKNOWN) | HRGMv2_3761_3 | HRGMv2_3761_3_128 | 136475 | 137173 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3761_3 | HRGMv2_3761_3_129 | 137262 | 138185 | + | ApbA | ApbA_C |
| TC | HRGMv2_3761_3 | HRGMv2_3761_3_130 | 138587 | 140941 | + | 9.A.8.1.6 |
| TC | HRGMv2_3761_3 | HRGMv2_3761_3_131 | 140954 | 142888 | + | 1.B.14.1.4 |
Gene ID: HRGMv2_3761_3_127
Type: CAZyme
Location: 135878 - 136474 (+)
Type: CAZyme
Location: 135878 - 136474 (+)
Gene ID: HRGMv2_3761_3_128
Type:
Location: 136475 - 137173 (+)
Type:
Location: 136475 - 137173 (+)
Gene ID: HRGMv2_3761_3_129
Type: pfam
Location: 137262 - 138185 (+)
Type: pfam
Location: 137262 - 138185 (+)
Gene ID: HRGMv2_3761_3_130
Type: TC
Location: 138587 - 140941 (+)
Type: TC
Location: 138587 - 140941 (+)
Gene ID: HRGMv2_3761_3_131
Type: TC
Location: 140954 - 142888 (+)
Type: TC
Location: 140954 - 142888 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3761_3_127 | vegan > omnivore | 19.01403 | 0.04105 |
| HRGMv2_3761_3_127 | vegetarian > omnivore | 18.46783 | 0.00132 |
| HRGMv2_3761_3_128 | vegan > omnivore | 18.57823 | 0.04105 |
| HRGMv2_3761_3_128 | vegetarian > omnivore | 18.03662 | 0.00132 |