Cluster: HRGMv2_3761_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3761
- CGC Family ID: CGCFAM_03112
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3761_2 | HRGMv2_3761_2_21 | 21827 | 24952 | - | 2.A.6.3.1 |
| pfam | HRGMv2_3761_2 | HRGMv2_3761_2_22 | 24949 | 26181 | - | HlyD_2 | HlyD_3 | Biotin_lipoyl_2 | HlyD_D23 |
| CAZyme | HRGMv2_3761_2 | HRGMv2_3761_2_23 | 26471 | 27733 | - | GT2 |
| pfam | HRGMv2_3761_2 | HRGMv2_3761_2_24 | 27730 | 28458 | - | CDP-OH_P_transf |
| pfam | HRGMv2_3761_2 | HRGMv2_3761_2_25 | 28459 | 29106 | - | PS_Dcarbxylase |
| CAZyme | HRGMv2_3761_2 | HRGMv2_3761_2_26 | 29106 | 29855 | - | GT26 |
Gene ID: HRGMv2_3761_2_21
Type: TC
Location: 21827 - 24952 (-)
Type: TC
Location: 21827 - 24952 (-)
Gene ID: HRGMv2_3761_2_22
Type: pfam
Location: 24949 - 26181 (-)
Type: pfam
Location: 24949 - 26181 (-)
Gene ID: HRGMv2_3761_2_23
Type: CAZyme
Location: 26471 - 27733 (-)
Type: CAZyme
Location: 26471 - 27733 (-)
Gene ID: HRGMv2_3761_2_24
Type: pfam
Location: 27730 - 28458 (-)
Type: pfam
Location: 27730 - 28458 (-)
Gene ID: HRGMv2_3761_2_25
Type: pfam
Location: 28459 - 29106 (-)
Type: pfam
Location: 28459 - 29106 (-)
Gene ID: HRGMv2_3761_2_26
Type: CAZyme
Location: 29106 - 29855 (-)
Type: CAZyme
Location: 29106 - 29855 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3761_2_25 | vegan > omnivore | 1.76092 | 0.04105 |
| HRGMv2_3761_2_25 | vegetarian > omnivore | 2.05532 | 0.00132 |
| HRGMv2_3761_2_26 | vegan > omnivore | 19.18600 | 0.04105 |
| HRGMv2_3761_2_26 | vegetarian > omnivore | 19.67917 | 0.00132 |