Cluster: HRGMv2_3761_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3761
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3761_1 | HRGMv2_3761_1_424 | 474249 | 475037 | - | 3.A.1.34.1 |
| TC | HRGMv2_3761_1 | HRGMv2_3761_1_425 | 475040 | 475921 | - | 3.A.1.34.1 |
| pfam | HRGMv2_3761_1 | HRGMv2_3761_1_426 | 476021 | 477028 | - | ABC_sub_bind |
| TC | HRGMv2_3761_1 | HRGMv2_3761_1_427 | 477156 | 478145 | - | 3.A.1.34.1 |
| pfam | HRGMv2_3761_1 | HRGMv2_3761_1_428 | 478417 | 478602 | - | Ribosomal_L32p |
| pfam | HRGMv2_3761_1 | HRGMv2_3761_1_429 | 478868 | 480268 | - | DUF6056 |
| CAZyme | HRGMv2_3761_1 | HRGMv2_3761_1_430 | 480280 | 481212 | - | GT2 |
Gene ID: HRGMv2_3761_1_424
Type: TC
Location: 474249 - 475037 (-)
Type: TC
Location: 474249 - 475037 (-)
Gene ID: HRGMv2_3761_1_425
Type: TC
Location: 475040 - 475921 (-)
Type: TC
Location: 475040 - 475921 (-)
Gene ID: HRGMv2_3761_1_426
Type: pfam
Location: 476021 - 477028 (-)
Type: pfam
Location: 476021 - 477028 (-)
Gene ID: HRGMv2_3761_1_427
Type: TC
Location: 477156 - 478145 (-)
Type: TC
Location: 477156 - 478145 (-)
Gene ID: HRGMv2_3761_1_428
Type: pfam
Location: 478417 - 478602 (-)
Type: pfam
Location: 478417 - 478602 (-)
Gene ID: HRGMv2_3761_1_429
Type: pfam
Location: 478868 - 480268 (-)
Type: pfam
Location: 478868 - 480268 (-)
Gene ID: HRGMv2_3761_1_430
Type: CAZyme
Location: 480280 - 481212 (-)
Type: CAZyme
Location: 480280 - 481212 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3761_1_425 | vegan > omnivore | 4.43955 | 0.04105 |
| HRGMv2_3761_1_425 | vegetarian > omnivore | 5.09316 | 0.00132 |
| HRGMv2_3761_1_427 | vegan > omnivore | 1.53526 | 0.04105 |
| HRGMv2_3761_1_427 | vegetarian > omnivore | 2.10419 | 0.00132 |
| HRGMv2_3761_1_428 | vegan > omnivore | 1.35388 | 0.04105 |
| HRGMv2_3761_1_428 | vegetarian > omnivore | 1.40313 | 0.00132 |