Cluster: HRGMv2_3760_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3760
- CGC Family ID: CGCFAM_00003
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3760_71 | HRGMv2_3760_71_5 | 4783 | 5793 | - | 9.B.18.2.1 |
| CAZyme | HRGMv2_3760_71 | HRGMv2_3760_71_6 | 5815 | 7017 | - | GT4 |
| TC | HRGMv2_3760_71 | HRGMv2_3760_71_7 | 7021 | 7617 | - | 9.B.18.1.1 |
| pfam | HRGMv2_3760_71 | HRGMv2_3760_71_8 | 8266 | 9201 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
| TC | HRGMv2_3760_71 | HRGMv2_3760_71_9 | 9492 | 10265 | - | 8.A.3.2.1 |
| TC | HRGMv2_3760_71 | HRGMv2_3760_71_10 | 10407 | 11867 | - | 8.A.3.3.3 |
Gene ID: HRGMv2_3760_71_5
Type: TC
Location: 4783 - 5793 (-)
Type: TC
Location: 4783 - 5793 (-)
Gene ID: HRGMv2_3760_71_6
Type: CAZyme
Location: 5815 - 7017 (-)
Type: CAZyme
Location: 5815 - 7017 (-)
Gene ID: HRGMv2_3760_71_7
Type: TC
Location: 7021 - 7617 (-)
Type: TC
Location: 7021 - 7617 (-)
Gene ID: HRGMv2_3760_71_8
Type: pfam
Location: 8266 - 9201 (-)
Type: pfam
Location: 8266 - 9201 (-)
Gene ID: HRGMv2_3760_71_9
Type: TC
Location: 9492 - 10265 (-)
Type: TC
Location: 9492 - 10265 (-)
Gene ID: HRGMv2_3760_71_10
Type: TC
Location: 10407 - 11867 (-)
Type: TC
Location: 10407 - 11867 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.