Cluster: HRGMv2_3760_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3760
- CGC Family ID: CGCFAM_01030
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3760_9 | HRGMv2_3760_9_1 | 204 | 923 | - | 3.A.1.4.10 |
| TC | HRGMv2_3760_9 | HRGMv2_3760_9_2 | 923 | 1687 | - | 3.A.1.4.10 |
| TC | HRGMv2_3760_9 | HRGMv2_3760_9_3 | 1687 | 2646 | - | 3.A.1.4.8 |
| TC | HRGMv2_3760_9 | HRGMv2_3760_9_4 | 2646 | 3527 | - | 3.A.1.4.10 |
| NULL(UNKNOWN) | HRGMv2_3760_9 | HRGMv2_3760_9_5 | 4574 | 5275 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3760_9 | HRGMv2_3760_9_6 | 5613 | 6203 | - | GH23 |
Gene ID: HRGMv2_3760_9_1
Type: TC
Location: 204 - 923 (-)
Type: TC
Location: 204 - 923 (-)
Gene ID: HRGMv2_3760_9_2
Type: TC
Location: 923 - 1687 (-)
Type: TC
Location: 923 - 1687 (-)
Gene ID: HRGMv2_3760_9_3
Type: TC
Location: 1687 - 2646 (-)
Type: TC
Location: 1687 - 2646 (-)
Gene ID: HRGMv2_3760_9_4
Type: TC
Location: 2646 - 3527 (-)
Type: TC
Location: 2646 - 3527 (-)
Gene ID: HRGMv2_3760_9_5
Type:
Location: 4574 - 5275 (-)
Type:
Location: 4574 - 5275 (-)
Gene ID: HRGMv2_3760_9_6
Type: CAZyme
Location: 5613 - 6203 (-)
Type: CAZyme
Location: 5613 - 6203 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3760_9_2 | vegetarian > vegan | 1.27028 | 0.03161 |