Cluster: HRGMv2_3759_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3759
- CGC Family ID: CGCFAM_10428
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3759_80 | HRGMv2_3759_80_4 | 2360 | 3265 | + | 3.A.11.1.4 |
| pfam | HRGMv2_3759_80 | HRGMv2_3759_80_5 | 3267 | 3476 | + | DUF3006 |
| pfam | HRGMv2_3759_80 | HRGMv2_3759_80_6 | 3558 | 4283 | - | UDG |
| CAZyme | HRGMv2_3759_80 | HRGMv2_3759_80_7 | 4280 | 5881 | - | GT83 |
| CAZyme | HRGMv2_3759_80 | HRGMv2_3759_80_8 | 6025 | 7539 | - | GT83 |
| TC | HRGMv2_3759_80 | HRGMv2_3759_80_9 | 7581 | 8174 | - | 9.B.27.2.5 |
Gene ID: HRGMv2_3759_80_4
Type: TC
Location: 2360 - 3265 (+)
Type: TC
Location: 2360 - 3265 (+)
Gene ID: HRGMv2_3759_80_5
Type: pfam
Location: 3267 - 3476 (+)
Type: pfam
Location: 3267 - 3476 (+)
Gene ID: HRGMv2_3759_80_6
Type: pfam
Location: 3558 - 4283 (-)
Type: pfam
Location: 3558 - 4283 (-)
Gene ID: HRGMv2_3759_80_7
Type: CAZyme
Location: 4280 - 5881 (-)
Type: CAZyme
Location: 4280 - 5881 (-)
Gene ID: HRGMv2_3759_80_8
Type: CAZyme
Location: 6025 - 7539 (-)
Type: CAZyme
Location: 6025 - 7539 (-)
Gene ID: HRGMv2_3759_80_9
Type: TC
Location: 7581 - 8174 (-)
Type: TC
Location: 7581 - 8174 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
UBA1822
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.