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Cluster: HRGMv2_3756_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3756_6 HRGMv2_3756_6_27 28509 29948 + 2.A.3.1.2
TC HRGMv2_3756_6 HRGMv2_3756_6_28 30009 31364 - 9.A.40.2.2
pfam HRGMv2_3756_6 HRGMv2_3756_6_29 31504 33423 + Sulfatase
CAZyme HRGMv2_3756_6 HRGMv2_3756_6_30 33456 34214 + GT2
pfam HRGMv2_3756_6 HRGMv2_3756_6_31 34266 36290 + Sulfatase
CAZyme HRGMv2_3756_6 HRGMv2_3756_6_32 36357 37421 + GT4
pfam HRGMv2_3756_6 HRGMv2_3756_6_33 37436 38383 + DUF535
CAZyme HRGMv2_3756_6 HRGMv2_3756_6_34 38424 39185 + GT25
TC HRGMv2_3756_6 HRGMv2_3756_6_35 39254 40834 + 2.A.49.5.5
TC HRGMv2_3756_6 HRGMv2_3756_6_36 41055 42353 + 2.A.1.15.11
Gene ID: HRGMv2_3756_6_27
Type: TC
Location: 28509 - 29948 (+)
Gene ID: HRGMv2_3756_6_28
Type: TC
Location: 30009 - 31364 (-)
Gene ID: HRGMv2_3756_6_29
Type: pfam
Location: 31504 - 33423 (+)
Gene ID: HRGMv2_3756_6_30
Type: CAZyme
Location: 33456 - 34214 (+)
Gene ID: HRGMv2_3756_6_31
Type: pfam
Location: 34266 - 36290 (+)
Gene ID: HRGMv2_3756_6_32
Type: CAZyme
Location: 36357 - 37421 (+)
Gene ID: HRGMv2_3756_6_33
Type: pfam
Location: 37436 - 38383 (+)
Gene ID: HRGMv2_3756_6_34
Type: CAZyme
Location: 38424 - 39185 (+)
Gene ID: HRGMv2_3756_6_35
Type: TC
Location: 39254 - 40834 (+)
Gene ID: HRGMv2_3756_6_36
Type: TC
Location: 41055 - 42353 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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