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Cluster: HRGMv2_3756_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3756_4 HRGMv2_3756_4_109 125370 127328 - 4.A.2.1.4
STP HRGMv2_3756_4 HRGMv2_3756_4_110 127391 128305 - PfkB
pfam HRGMv2_3756_4 HRGMv2_3756_4_111 128322 129152 - DAP_epimerase | DAP_epimerase
TC HRGMv2_3756_4 HRGMv2_3756_4_112 129284 131008 + 8.A.7.1.1
TC HRGMv2_3756_4 HRGMv2_3756_4_113 131139 131399 + 8.A.8.1.1
NULL(UNKNOWN) HRGMv2_3756_4 HRGMv2_3756_4_114 131461 132723 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3756_4 HRGMv2_3756_4_115 132710 133642 + GT51
pfam HRGMv2_3756_4 HRGMv2_3756_4_116 133952 135175 + Arginosuc_synth | Arginosuc_syn_C
pfam HRGMv2_3756_4 HRGMv2_3756_4_117 135175 136605 + Lyase_1 | ASL_C2
TC HRGMv2_3756_4 HRGMv2_3756_4_118 136892 138223 + 2.A.3.2.1
Gene ID: HRGMv2_3756_4_109
Type: TC
Location: 125370 - 127328 (-)
Gene ID: HRGMv2_3756_4_110
Type: STP
Location: 127391 - 128305 (-)
Gene ID: HRGMv2_3756_4_111
Type: pfam
Location: 128322 - 129152 (-)
Gene ID: HRGMv2_3756_4_112
Type: TC
Location: 129284 - 131008 (+)
Gene ID: HRGMv2_3756_4_113
Type: TC
Location: 131139 - 131399 (+)
Gene ID: HRGMv2_3756_4_114
Type:
Location: 131461 - 132723 (+)
Gene ID: HRGMv2_3756_4_115
Type: CAZyme
Location: 132710 - 133642 (+)
Gene ID: HRGMv2_3756_4_116
Type: pfam
Location: 133952 - 135175 (+)
Gene ID: HRGMv2_3756_4_117
Type: pfam
Location: 135175 - 136605 (+)
Gene ID: HRGMv2_3756_4_118
Type: TC
Location: 136892 - 138223 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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