Cluster: HRGMv2_3756_CGC6
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3756
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3756_4 | HRGMv2_3756_4_87 | 94828 | 95979 | + | GH3 |
| pfam | HRGMv2_3756_4 | HRGMv2_3756_4_88 | 96133 | 97161 | - | Ribonuc_red_sm |
| pfam | HRGMv2_3756_4 | HRGMv2_3756_4_89 | 97315 | 99597 | - | Ribonuc_red_lgN | Ribonuc_red_lgC | ATP-cone |
| TC | HRGMv2_3756_4 | HRGMv2_3756_4_90 | 100037 | 101344 | + | 2.A.23.2.11 |
| pfam | HRGMv2_3756_4 | HRGMv2_3756_4_91 | 101638 | 105888 | + | BcrAD_BadFG | BcrAD_BadFG | DUF2229 |
| NULL(UNKNOWN) | HRGMv2_3756_4 | HRGMv2_3756_4_92 | 106144 | 106842 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3756_4 | HRGMv2_3756_4_93 | 106964 | 108181 | - | 2.A.1.2.97 |
| NULL(UNKNOWN) | HRGMv2_3756_4 | HRGMv2_3756_4_94 | 108516 | 109034 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3756_4 | HRGMv2_3756_4_95 | 109139 | 110779 | - | 2.A.14.1.2 |
| TC | HRGMv2_3756_4 | HRGMv2_3756_4_96 | 110929 | 112560 | - | 2.A.14.1.2 |
| pfam | HRGMv2_3756_4 | HRGMv2_3756_4_97 | 112682 | 113818 | - | Ldh_2 |
| TC | HRGMv2_3756_4 | HRGMv2_3756_4_98 | 114260 | 116257 | + | 3.D.1.9.2 |
| TC | HRGMv2_3756_4 | HRGMv2_3756_4_99 | 116282 | 117613 | + | 2.A.26.1.9 |
| pfam | HRGMv2_3756_4 | HRGMv2_3756_4_100 | 117762 | 117998 | + | DUF1653 |
| pfam | HRGMv2_3756_4 | HRGMv2_3756_4_101 | 118011 | 118787 | + | Hydrolase_3 |
| TC | HRGMv2_3756_4 | HRGMv2_3756_4_102 | 118831 | 119460 | + | 3.D.1.8.1 |
Gene ID: HRGMv2_3756_4_87
Type: CAZyme
Location: 94828 - 95979 (+)
Type: CAZyme
Location: 94828 - 95979 (+)
Gene ID: HRGMv2_3756_4_88
Type: pfam
Location: 96133 - 97161 (-)
Type: pfam
Location: 96133 - 97161 (-)
Gene ID: HRGMv2_3756_4_89
Type: pfam
Location: 97315 - 99597 (-)
Type: pfam
Location: 97315 - 99597 (-)
Gene ID: HRGMv2_3756_4_90
Type: TC
Location: 100037 - 101344 (+)
Type: TC
Location: 100037 - 101344 (+)
Gene ID: HRGMv2_3756_4_91
Type: pfam
Location: 101638 - 105888 (+)
Type: pfam
Location: 101638 - 105888 (+)
Gene ID: HRGMv2_3756_4_92
Type:
Location: 106144 - 106842 (+)
Type:
Location: 106144 - 106842 (+)
Gene ID: HRGMv2_3756_4_93
Type: TC
Location: 106964 - 108181 (-)
Type: TC
Location: 106964 - 108181 (-)
Gene ID: HRGMv2_3756_4_94
Type:
Location: 108516 - 109034 (+)
Type:
Location: 108516 - 109034 (+)
Gene ID: HRGMv2_3756_4_95
Type: TC
Location: 109139 - 110779 (-)
Type: TC
Location: 109139 - 110779 (-)
Gene ID: HRGMv2_3756_4_96
Type: TC
Location: 110929 - 112560 (-)
Type: TC
Location: 110929 - 112560 (-)
Gene ID: HRGMv2_3756_4_97
Type: pfam
Location: 112682 - 113818 (-)
Type: pfam
Location: 112682 - 113818 (-)
Gene ID: HRGMv2_3756_4_98
Type: TC
Location: 114260 - 116257 (+)
Type: TC
Location: 114260 - 116257 (+)
Gene ID: HRGMv2_3756_4_99
Type: TC
Location: 116282 - 117613 (+)
Type: TC
Location: 116282 - 117613 (+)
Gene ID: HRGMv2_3756_4_100
Type: pfam
Location: 117762 - 117998 (+)
Type: pfam
Location: 117762 - 117998 (+)
Gene ID: HRGMv2_3756_4_101
Type: pfam
Location: 118011 - 118787 (+)
Type: pfam
Location: 118011 - 118787 (+)
Gene ID: HRGMv2_3756_4_102
Type: TC
Location: 118831 - 119460 (+)
Type: TC
Location: 118831 - 119460 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp900550455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.