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Cluster: HRGMv2_3756_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3756_2 HRGMv2_3756_2_83 88173 88964 - 3.A.1.34.1
TC HRGMv2_3756_2 HRGMv2_3756_2_84 88975 89850 - 3.A.1.34.1
TC HRGMv2_3756_2 HRGMv2_3756_2_85 89898 90878 - 3.A.1.34.1
TC HRGMv2_3756_2 HRGMv2_3756_2_86 90898 91881 - 3.A.1.34.1
peptidase HRGMv2_3756_2 HRGMv2_3756_2_87 92013 93404 - M18.UPW
pfam HRGMv2_3756_2 HRGMv2_3756_2_88 93408 94379 - RNase_T
CAZyme HRGMv2_3756_2 HRGMv2_3756_2_89 94383 95423 - GT9
CAZyme HRGMv2_3756_2 HRGMv2_3756_2_90 95407 96456 - GT9
Gene ID: HRGMv2_3756_2_83
Type: TC
Location: 88173 - 88964 (-)
Gene ID: HRGMv2_3756_2_84
Type: TC
Location: 88975 - 89850 (-)
Gene ID: HRGMv2_3756_2_85
Type: TC
Location: 89898 - 90878 (-)
Gene ID: HRGMv2_3756_2_86
Type: TC
Location: 90898 - 91881 (-)
Gene ID: HRGMv2_3756_2_87
Type: peptidase
Location: 92013 - 93404 (-)
Gene ID: HRGMv2_3756_2_88
Type: pfam
Location: 93408 - 94379 (-)
Gene ID: HRGMv2_3756_2_89
Type: CAZyme
Location: 94383 - 95423 (-)
Gene ID: HRGMv2_3756_2_90
Type: CAZyme
Location: 95407 - 96456 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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