Cluster: HRGMv2_3754_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3754
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3754_108 | HRGMv2_3754_108_4 | 2230 | 4212 | - | 3.A.1.120.6 |
| NULL(UNKNOWN) | HRGMv2_3754_108 | HRGMv2_3754_108_5 | 4223 | 4558 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3754_108 | HRGMv2_3754_108_6 | 4585 | 5748 | - | GT28 |
| pfam | HRGMv2_3754_108 | HRGMv2_3754_108_7 | 5893 | 6192 | - | Bac_DNA_binding | HU-HIG |
| pfam | HRGMv2_3754_108 | HRGMv2_3754_108_8 | 6258 | 7400 | - | MazG | MazG |
| TC | HRGMv2_3754_108 | HRGMv2_3754_108_9 | 7403 | 9013 | - | 2.A.66.2.14 |
Gene ID: HRGMv2_3754_108_4
Type: TC
Location: 2230 - 4212 (-)
Type: TC
Location: 2230 - 4212 (-)
Gene ID: HRGMv2_3754_108_5
Type:
Location: 4223 - 4558 (-)
Type:
Location: 4223 - 4558 (-)
Gene ID: HRGMv2_3754_108_6
Type: CAZyme
Location: 4585 - 5748 (-)
Type: CAZyme
Location: 4585 - 5748 (-)
Gene ID: HRGMv2_3754_108_7
Type: pfam
Location: 5893 - 6192 (-)
Type: pfam
Location: 5893 - 6192 (-)
Gene ID: HRGMv2_3754_108_8
Type: pfam
Location: 6258 - 7400 (-)
Type: pfam
Location: 6258 - 7400 (-)
Gene ID: HRGMv2_3754_108_9
Type: TC
Location: 7403 - 9013 (-)
Type: TC
Location: 7403 - 9013 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella_A
Species
Veillonella_A sp900765165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.