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Cluster: HRGMv2_3754_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3754_64 HRGMv2_3754_64_14 16716 17957 - 2.A.27.1.3
CAZyme HRGMv2_3754_64 HRGMv2_3754_64_15 18322 19179 + CE4
peptidase HRGMv2_3754_64 HRGMv2_3754_64_16 19320 20546 - M20.UPD
sulfatase HRGMv2_3754_64 HRGMv2_3754_64_17 20736 22319 - S1_97
TC HRGMv2_3754_64 HRGMv2_3754_64_18 22512 25013 + 3.A.7.7.1
NULL(UNKNOWN) HRGMv2_3754_64 HRGMv2_3754_64_19 25837 25980 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3754_64 HRGMv2_3754_64_20 26682 27977 - 1.I.1.1.3
STP HRGMv2_3754_64 HRGMv2_3754_64_21 28391 28627 + FeoA
TC HRGMv2_3754_64 HRGMv2_3754_64_22 28630 31107 + 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_3754_64 HRGMv2_3754_64_23 31339 31542 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3754_64 HRGMv2_3754_64_24 31673 32011 + DUF6110
TC HRGMv2_3754_64 HRGMv2_3754_64_25 32014 32982 + 3.A.3.32.3
TC HRGMv2_3754_64 HRGMv2_3754_64_26 33050 33307 + 3.A.3.32.3
Gene ID: HRGMv2_3754_64_14
Type: TC
Location: 16716 - 17957 (-)
Gene ID: HRGMv2_3754_64_15
Type: CAZyme
Location: 18322 - 19179 (+)
Gene ID: HRGMv2_3754_64_16
Type: peptidase
Location: 19320 - 20546 (-)
Gene ID: HRGMv2_3754_64_17
Type: sulfatase
Location: 20736 - 22319 (-)
Gene ID: HRGMv2_3754_64_18
Type: TC
Location: 22512 - 25013 (+)
Gene ID: HRGMv2_3754_64_19
Type:
Location: 25837 - 25980 (-)
Gene ID: HRGMv2_3754_64_20
Type: TC
Location: 26682 - 27977 (-)
Gene ID: HRGMv2_3754_64_21
Type: STP
Location: 28391 - 28627 (+)
Gene ID: HRGMv2_3754_64_22
Type: TC
Location: 28630 - 31107 (+)
Gene ID: HRGMv2_3754_64_23
Type:
Location: 31339 - 31542 (+)
Gene ID: HRGMv2_3754_64_24
Type: pfam
Location: 31673 - 32011 (+)
Gene ID: HRGMv2_3754_64_25
Type: TC
Location: 32014 - 32982 (+)
Gene ID: HRGMv2_3754_64_26
Type: TC
Location: 33050 - 33307 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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