Cluster: HRGMv2_3754_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3754
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3754_54 | HRGMv2_3754_54_21 | 21223 | 22896 | + | GH2 |
| pfam | HRGMv2_3754_54 | HRGMv2_3754_54_22 | 23377 | 24981 | + | WG_beta_rep | WG_beta_rep | WG_beta_rep |
| pfam | HRGMv2_3754_54 | HRGMv2_3754_54_23 | 24966 | 25622 | + | DUF1638 |
| TC | HRGMv2_3754_54 | HRGMv2_3754_54_24 | 26200 | 27759 | - | 2.A.66.2.14 |
Gene ID: HRGMv2_3754_54_21
Type: CAZyme
Location: 21223 - 22896 (+)
Type: CAZyme
Location: 21223 - 22896 (+)
Gene ID: HRGMv2_3754_54_22
Type: pfam
Location: 23377 - 24981 (+)
Type: pfam
Location: 23377 - 24981 (+)
Gene ID: HRGMv2_3754_54_23
Type: pfam
Location: 24966 - 25622 (+)
Type: pfam
Location: 24966 - 25622 (+)
Gene ID: HRGMv2_3754_54_24
Type: TC
Location: 26200 - 27759 (-)
Type: TC
Location: 26200 - 27759 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella_A
Species
Veillonella_A sp900765165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.