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Cluster: HRGMv2_3754_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3754_26 HRGMv2_3754_26_12 12191 13039 + 8.A.5.1.6
NULL(UNKNOWN) HRGMv2_3754_26 HRGMv2_3754_26_13 13187 13759 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3754_26 HRGMv2_3754_26_14 13801 15159 + 2.A.1.2.25
TC HRGMv2_3754_26 HRGMv2_3754_26_15 15358 16083 - 2.A.3.3.16
TC HRGMv2_3754_26 HRGMv2_3754_26_16 16108 16671 - 2.A.3.3.18
peptidase HRGMv2_3754_26 HRGMv2_3754_26_17 16786 17523 - C26.UPW
TC HRGMv2_3754_26 HRGMv2_3754_26_18 17895 18539 + 9.B.27.2.5
CAZyme HRGMv2_3754_26 HRGMv2_3754_26_19 18555 20144 + GT83
Gene ID: HRGMv2_3754_26_12
Type: TC
Location: 12191 - 13039 (+)
Gene ID: HRGMv2_3754_26_13
Type:
Location: 13187 - 13759 (+)
Gene ID: HRGMv2_3754_26_14
Type: TC
Location: 13801 - 15159 (+)
Gene ID: HRGMv2_3754_26_15
Type: TC
Location: 15358 - 16083 (-)
Gene ID: HRGMv2_3754_26_16
Type: TC
Location: 16108 - 16671 (-)
Gene ID: HRGMv2_3754_26_17
Type: peptidase
Location: 16786 - 17523 (-)
Gene ID: HRGMv2_3754_26_18
Type: TC
Location: 17895 - 18539 (+)
Gene ID: HRGMv2_3754_26_19
Type: CAZyme
Location: 18555 - 20144 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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