Cluster: HRGMv2_3740_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3740
- CGC Family ID: CGCFAM_00279
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3740_54 | HRGMv2_3740_54_3 | 4075 | 4791 | + | GT26 |
| pfam | HRGMv2_3740_54 | HRGMv2_3740_54_4 | 4791 | 5438 | + | PS_Dcarbxylase |
| pfam | HRGMv2_3740_54 | HRGMv2_3740_54_5 | 5439 | 6161 | + | CDP-OH_P_transf |
| CAZyme | HRGMv2_3740_54 | HRGMv2_3740_54_6 | 6158 | 7420 | + | GT2 |
| TC | HRGMv2_3740_54 | HRGMv2_3740_54_7 | 9367 | 18531 | + | 1.B.23.1.3 |
Gene ID: HRGMv2_3740_54_3
Type: CAZyme
Location: 4075 - 4791 (+)
Type: CAZyme
Location: 4075 - 4791 (+)
Gene ID: HRGMv2_3740_54_4
Type: pfam
Location: 4791 - 5438 (+)
Type: pfam
Location: 4791 - 5438 (+)
Gene ID: HRGMv2_3740_54_5
Type: pfam
Location: 5439 - 6161 (+)
Type: pfam
Location: 5439 - 6161 (+)
Gene ID: HRGMv2_3740_54_6
Type: CAZyme
Location: 6158 - 7420 (+)
Type: CAZyme
Location: 6158 - 7420 (+)
Gene ID: HRGMv2_3740_54_7
Type: TC
Location: 9367 - 18531 (+)
Type: TC
Location: 9367 - 18531 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Species
Dialister sp900765565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3740_54_3 | vegan > omnivore | 1.32358 | 0.04488 |
| HRGMv2_3740_54_3 | vegetarian > omnivore | 2.44976 | 0.00565 |
| HRGMv2_3740_54_3 | vegetarian > vegan | 1.12617 | 0.02177 |
| HRGMv2_3740_54_4 | vegetarian > omnivore | 1.98136 | 0.00565 |
| HRGMv2_3740_54_4 | vegetarian > vegan | 1.24161 | 0.02177 |
| HRGMv2_3740_54_5 | vegan > omnivore | 1.19741 | 0.04488 |
| HRGMv2_3740_54_5 | vegetarian > omnivore | 2.34517 | 0.00565 |
| HRGMv2_3740_54_5 | vegetarian > vegan | 1.14776 | 0.02177 |
| HRGMv2_3740_54_6 | vegetarian > omnivore | 1.15020 | 0.00565 |
| HRGMv2_3740_54_6 | vegetarian > vegan | 1.35271 | 0.02177 |