dbCAN Logo

Cluster: HRGMv2_3740_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3740_36 HRGMv2_3740_36_12 12487 14565 + GT51
NULL(UNKNOWN) HRGMv2_3740_36 HRGMv2_3740_36_13 14688 15209 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3740_36 HRGMv2_3740_36_14 16138 17160 - IU_nuc_hydro
TC HRGMv2_3740_36 HRGMv2_3740_36_15 17173 18540 - 2.A.61.1.2
TC HRGMv2_3740_36 HRGMv2_3740_36_16 19070 20722 - 3.A.1.117.3
TC HRGMv2_3740_36 HRGMv2_3740_36_17 21347 23068 - 3.A.1.210.9
NULL(UNKNOWN) HRGMv2_3740_36 HRGMv2_3740_36_18 23065 23388 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3740_36 HRGMv2_3740_36_19 23510 23896 - 1.A.43.1.6
Gene ID: HRGMv2_3740_36_12
Type: CAZyme
Location: 12487 - 14565 (+)
Gene ID: HRGMv2_3740_36_13
Type:
Location: 14688 - 15209 (-)
Gene ID: HRGMv2_3740_36_14
Type: pfam
Location: 16138 - 17160 (-)
Gene ID: HRGMv2_3740_36_15
Type: TC
Location: 17173 - 18540 (-)
Gene ID: HRGMv2_3740_36_16
Type: TC
Location: 19070 - 20722 (-)
Gene ID: HRGMv2_3740_36_17
Type: TC
Location: 21347 - 23068 (-)
Gene ID: HRGMv2_3740_36_18
Type:
Location: 23065 - 23388 (-)
Gene ID: HRGMv2_3740_36_19
Type: TC
Location: 23510 - 23896 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3740_36_12 vegetarian > omnivore 1.37781 0.00565
HRGMv2_3740_36_12 vegetarian > vegan 1.38570 0.02177

🧭 Explore Read Mapping of CGC

← Back to Cluster List