dbCAN HGM

Cluster: HRGMv2_3740_CGC5

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_3740_25	HRGMv2_3740_25_2	911	2551	+	2.A.49.5.5
NULL(UNKNOWN)	HRGMv2_3740_25	HRGMv2_3740_25_3	2865	3512	-	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	HRGMv2_3740_25	HRGMv2_3740_25_4	3878	4789	-	GT51
STP	HRGMv2_3740_25	HRGMv2_3740_25_5	5268	7217	+	HATPase_c
TF	HRGMv2_3740_25	HRGMv2_3740_25_6	7332	8258	-	HTH_1
TC	HRGMv2_3740_25	HRGMv2_3740_25_7	8902	10308	+	2.A.47.1.13
TC	HRGMv2_3740_25	HRGMv2_3740_25_8	10912	12555	+	2.A.1.15.17

Gene ID: HRGMv2_3740_25_2
Type: TC
Location: 911 - 2551 (+)

Gene ID: HRGMv2_3740_25_3
Type:
Location: 2865 - 3512 (-)

Gene ID: HRGMv2_3740_25_4
Type: CAZyme
Location: 3878 - 4789 (-)

Gene ID: HRGMv2_3740_25_5
Type: STP
Location: 5268 - 7217 (+)

Gene ID: HRGMv2_3740_25_6
Type: TF
Location: 7332 - 8258 (-)

Gene ID: HRGMv2_3740_25_7
Type: TC
Location: 8902 - 10308 (+)

Gene ID: HRGMv2_3740_25_8
Type: TC
Location: 10912 - 12555 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_3740_25_4	vegetarian > omnivore	2.01419	0.00565
HRGMv2_3740_25_4	vegetarian > vegan	1.64139	0.02177
HRGMv2_3740_25_7	vegan > omnivore	18.89699	0.02973
HRGMv2_3740_25_7	vegetarian > omnivore	20.02852	0.00565
HRGMv2_3740_25_7	vegetarian > vegan	1.13154	0.02177