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Cluster: HRGMv2_3740_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3740_68 HRGMv2_3740_68_1 360 956 + 9.B.27.2.5
CAZyme HRGMv2_3740_68 HRGMv2_3740_68_2 943 2541 + GT83
CAZyme HRGMv2_3740_68 HRGMv2_3740_68_3 2538 4286 + GT83
NULL(UNKNOWN) HRGMv2_3740_68 HRGMv2_3740_68_4 4595 5278 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3740_68 HRGMv2_3740_68_5 5337 5753 - GtrA_DPMS_TM
CAZyme HRGMv2_3740_68 HRGMv2_3740_68_6 6099 7049 - GT2
Gene ID: HRGMv2_3740_68_1
Type: TC
Location: 360 - 956 (+)
Gene ID: HRGMv2_3740_68_2
Type: CAZyme
Location: 943 - 2541 (+)
Gene ID: HRGMv2_3740_68_3
Type: CAZyme
Location: 2538 - 4286 (+)
Gene ID: HRGMv2_3740_68_4
Type:
Location: 4595 - 5278 (+)
Gene ID: HRGMv2_3740_68_5
Type: pfam
Location: 5337 - 5753 (-)
Gene ID: HRGMv2_3740_68_6
Type: CAZyme
Location: 6099 - 7049 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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