Cluster: HRGMv2_3740_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3740
- CGC Family ID: CGCFAM_00013
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3740_3 | HRGMv2_3740_3_32 | 31914 | 33035 | - | GT28 |
| pfam | HRGMv2_3740_3 | HRGMv2_3740_3_33 | 33047 | 34396 | - | AlaDh_PNT_C | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_3740_3 | HRGMv2_3740_3_34 | 34875 | 35840 | - | 9.B.146.1.3 |
Gene ID: HRGMv2_3740_3_32
Type: CAZyme
Location: 31914 - 33035 (-)
Type: CAZyme
Location: 31914 - 33035 (-)
Gene ID: HRGMv2_3740_3_33
Type: pfam
Location: 33047 - 34396 (-)
Type: pfam
Location: 33047 - 34396 (-)
Gene ID: HRGMv2_3740_3_34
Type: TC
Location: 34875 - 35840 (-)
Type: TC
Location: 34875 - 35840 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Species
Dialister sp900765565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3740_3_34 | vegan > omnivore | 4.78790 | 0.04488 |
| HRGMv2_3740_3_34 | vegetarian > omnivore | 3.36722 | 0.00565 |