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Cluster: HRGMv2_3739_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3739_35 HRGMv2_3739_35_2 966 1562 - GH23
pfam HRGMv2_3739_35 HRGMv2_3739_35_3 1559 2185 - CoaE
sulfatase HRGMv2_3739_35 HRGMv2_3739_35_4 2583 5162 - S1_2
TC HRGMv2_3739_35 HRGMv2_3739_35_5 5502 7469 + 1.B.14.1.4
TC HRGMv2_3739_35 HRGMv2_3739_35_6 8479 9198 - 3.A.1.4.10
TC HRGMv2_3739_35 HRGMv2_3739_35_7 9198 9962 - 3.A.1.4.10
TC HRGMv2_3739_35 HRGMv2_3739_35_8 9962 10924 - 3.A.1.4.8
TC HRGMv2_3739_35 HRGMv2_3739_35_9 10924 11991 - 3.A.1.4.10
Gene ID: HRGMv2_3739_35_2
Type: CAZyme
Location: 966 - 1562 (-)
Gene ID: HRGMv2_3739_35_3
Type: pfam
Location: 1559 - 2185 (-)
Gene ID: HRGMv2_3739_35_4
Type: sulfatase
Location: 2583 - 5162 (-)
Gene ID: HRGMv2_3739_35_5
Type: TC
Location: 5502 - 7469 (+)
Gene ID: HRGMv2_3739_35_6
Type: TC
Location: 8479 - 9198 (-)
Gene ID: HRGMv2_3739_35_7
Type: TC
Location: 9198 - 9962 (-)
Gene ID: HRGMv2_3739_35_8
Type: TC
Location: 9962 - 10924 (-)
Gene ID: HRGMv2_3739_35_9
Type: TC
Location: 10924 - 11991 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Veillonellales
→
Family
Dialisteraceae
→
Genus
Dialister
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3739_35_2 vegan > omnivore 1.23391 0.02973

🧭 Explore Read Mapping of CGC

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