Cluster: HRGMv2_3739_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3739
- CGC Family ID: CGCFAM_01930
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3739_24 | HRGMv2_3739_24_13 | 11434 | 12762 | - | GT30 |
| TC | HRGMv2_3739_24 | HRGMv2_3739_24_14 | 12902 | 14686 | - | 3.A.1.106.1 |
| CAZyme | HRGMv2_3739_24 | HRGMv2_3739_24_15 | 14667 | 15815 | - | GT19 |
Gene ID: HRGMv2_3739_24_13
Type: CAZyme
Location: 11434 - 12762 (-)
Type: CAZyme
Location: 11434 - 12762 (-)
Gene ID: HRGMv2_3739_24_14
Type: TC
Location: 12902 - 14686 (-)
Type: TC
Location: 12902 - 14686 (-)
Gene ID: HRGMv2_3739_24_15
Type: CAZyme
Location: 14667 - 15815 (-)
Type: CAZyme
Location: 14667 - 15815 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3739_24_13 | vegetarian > omnivore | 1.18060 | 0.00397 |
| HRGMv2_3739_24_15 | vegan > omnivore | 2.39895 | 0.02973 |
| HRGMv2_3739_24_15 | vegetarian > omnivore | 3.28339 | 0.00397 |